BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036A09SP1|AL430159
(893 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1599 1754 0.0
>3x_Contig1599
Length = 10178
Score = 1754 bits (883), Expect = 0.0
Identities = 889/893 (99%)
Strand = Plus / Minus
Query: 1 gatctttaaatgtattaacgccgaaagtctgaaaatctcaaaaaggtgttcggatagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5194 gatctttaaatgtattaacgccgaaagtctgaaaatctcaaaaaggtgttcggatagctc 5135
Query: 61 cctatagtttatttcgtcgtcattctcttctgtacaatgcgataaaatgtcaagaccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5134 cctatagtttatttcgtcgtcattctcttctgtacaatgcgataaaatgtcaagaccatt 5075
Query: 121 ttcatctggcgtgagatttaataactgttggtttagttccaaggcattgaacataatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5074 ttcatctggcgtgagatttaataactgttggtttagttccaaggcattgaacataatagt 5015
Query: 181 cttgaaattctgtgaagacacgttcaatttctctgatttcatttgccttatcagatttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5014 cttgaaattctgtgaagacacgttcaatttctctgatttcatttgccttatcagatttgt 4955
Query: 241 agtttcacccaatactttgaaaatgggcctattcaacaaatgtagggaatcgacttgtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4954 agtttcacccaatactttgaaaatgggcctattcaacaaatgtagggaatcgacttgtaa 4895
Query: 301 attgcaatcagtgaaatttgggtttgaagataataataacgtttcatattggttcatggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4894 attgcaatcagtgaaatttgggtttgaagataataataacgtttcatattggttcatggg 4835
Query: 361 gaattttgtggtctgtgaacccatgatatcatggtatatgamattcgctaataaccaatt 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4834 gaattttgtggtctgtgaacccatgatatcatggtatatgaaattcgctaataaccaatt 4775
Query: 421 tctggtcatcaagtcgatggcgtcgaactttgaactgttatcatccgtcaataacgaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4774 tctggtcatcaagtcgatggcgtcgaactttgaactgttatcatccgtcaataacgaaat 4715
Query: 481 caaattcgaaccaccaatatgttctttaatcaatttggcaccggtttgtagtaaaatctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4714 caaattcgaaccaccaatatgttctttaatcaatttggcaccggtttgtagtaaaatctg 4655
Query: 541 ccatctattaacgtccccttgacatatctctgccccacacaagaccaaaatttgagccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4654 ccatctattaacgtccccttgacatatctctgccccacacaagaccaaaatttgagccaa 4595
Query: 601 ggaatataaammtgatgatggcgattgctggtgctgtggttcatataaacattgtagcga 660
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4594 ggaatataaaaatgatgatggcgattgctggtgctgtggttcatataaacattgtagcga 4535
Query: 661 ctctcatgtgtaattgttggccaactttgagaaacgcgagtctctatctattataagtcg 720
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4534 ctctaatgtgtaattgttggccaactttgagaaacgcgagtctctatctattataagtcg 4475
Query: 721 agtggaagcaccaccttcatccagcgctggcacagatttagaaatggaaaggtgatgagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4474 agtggaagcaccaccttcatccagcgctggcacagatttagaaatggaaaggtgatgagc 4415
Query: 781 agcccatgcaagaataccatatagaatccccttatgtttatgtgccataggaaggaaaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4414 agcccatgcaagaataccatatagaatccccttatgtttatgtgccataggaaggaaaca 4355
Query: 841 ttggagataaaaattttgccttgctggtgcaatacaaatcacctgagctaaat 893
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4354 ttggagataaaaattttgccttgctggtgcaatacaaatcacctgagctaaat 4302
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6739
Number of Sequences: 1807
Number of extensions: 6739
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 893
length of database: 10,358,551
effective HSP length: 16
effective length of query: 877
effective length of database: 10,329,639
effective search space: 9059093403
effective search space used: 9059093403
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)